BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A01LP1|AL429138
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1564 0.0
>3x_Contig1806
Length = 53694
Score = 1564 bits (787), Expect = 0.0
Identities = 790/793 (99%)
Strand = Plus / Plus
Query: 1 atctctttgcaaggttcgtattatttgtcttaatgaatggattttcatccacttgaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25188 atctctttgcaaggttcgtattatttgtcttaatgaatggattttcatccacttgaagct 25247
Query: 61 cttggtctcaatttactaacaccaaaattttacccatataccggaaaaatattgttcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25248 cttggtctcaatttactaacaccaaaattttacccatataccggaaaaatattgttcata 25307
Query: 121 ttttcattgctatgtagactatgagcgatgcgttttttcccggtgctcgtgtatttattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25308 ttttcattgctatgtagactatgagcgatgcgttttttcccggtgctcgtgtatttattc 25367
Query: 181 agctcactaccatttttacgtaagttcggaatgagcagagctcatgatttagccggcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25368 agctcactaccatttttacgtaagttcggaatgagcagagctcatgatttagccggcggt 25427
Query: 241 gattccagcatgctacaggatatgagttcgctatcgatgttaaagatatggctagggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25428 gattccagcatgctacaggatatgagttcgctatcgatgttaaagatatggctagggtta 25487
Query: 301 gaaattcgtcaattgatgagcatctcttcaaaacagatatacgaactagtaaaaacggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25488 gaaattcgtcaattgatgagcatctcttcaaaacagatatacgaactagtaaaaacggat 25547
Query: 361 caattgtgtccaaattactaagaaaaaatggtaataaatggagaatattccaattctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25548 caattgtgtccaaattactaagaaaaaatggtaataaatggagaatattccaattctctt 25607
Query: 421 aatgcataacgaggataaacttccaaacaataacagttttgttgtataaragaaataatt 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 25608 aatgcataacgaggataaacttccaaacaataacagttttgttgtataaaagaaataatt 25667
Query: 481 tacctgacaactctgataaacctaccataagttgattagttcaagaaaaaatatagctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25668 tacctgacaactctgataaacctaccataagttgattagttcaagaaaaaatatagctaa 25727
Query: 541 cgacccctaaaatagtcaccaataacagcggtgaaaaataaatataccagggattaatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25728 cgacccctaaaatagtcaccaataacagcggtgaaaaataaatataccagggattaatta 25787
Query: 601 aaaagagccctagctgaagcccatcatgacatatttcaagattacttttcataatgcatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25788 aaaagagccctagctgaagcccatcatgacatatttcaagattacttttcataatgcatg 25847
Query: 661 aattctcgtttcccgtagttggatccaaattccgaagtatttaactgtyaaacaacaata 720
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 25848 aattctcgtttcccgtagttggatccaaattccgaagtatttaactgtcaaacaacaata 25907
Query: 721 atgacgcagaaagcaatcgatcttttgcagagacgttccttttttcctaaagatttccgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25908 atgacgcagaaagcaatcgatcttttgcagagacgttccttttttcctaaagatttccgt 25967
Query: 781 gaaawctctcggg 793
|||| ||||||||
Sbjct: 25968 gaaatctctcggg 25980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6250
Number of Sequences: 1807
Number of extensions: 6250
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)